Update doxygen configuration file for new tree layout.
diff --git a/doxygen/gallium.doxy b/doxygen/gallium.doxy
index fbcec03..3ef8c6c 100644
--- a/doxygen/gallium.doxy
+++ b/doxygen/gallium.doxy
@@ -113,7 +113,7 @@
 # If left blank the directory from which doxygen is run is used as the 
 # path to strip.
 
-STRIP_FROM_PATH        = ../src/mesa
+STRIP_FROM_PATH        = ../src
 
 # The STRIP_FROM_INC_PATH tag can be used to strip a user-defined part of 
 # the path mentioned in the documentation of a class, which tells 
@@ -478,9 +478,9 @@
 # with spaces.
 
 INPUT                  = gallium.doc \
-                         ../src/mesa/pipe \
+                         ../src/gallium \
                          ../src/mesa/state_tracker \
-                         ../src/mesa/drivers/dri/intel_winsys
+                         ../src/mesa/x86/rtasm
 
 # This tag can be used to specify the character encoding of the source files that 
 # doxygen parses. Internally doxygen uses the UTF-8 encoding, which is also the default