Fix method doc signatures for multiline required parameters (#374)
* Fix method doc signatures for multiline required parameters.
Existing doc generator failed to recognize parameters as required when parameter descriptions
extended over more than one line. Besides presenting incorrect information, resulting
inconsistencies broke checks for automated sample generation.
* Regen docs
diff --git a/docs/dyn/genomics_v1.reads.html b/docs/dyn/genomics_v1.reads.html
index 764e2fe..e8c2fb7 100644
--- a/docs/dyn/genomics_v1.reads.html
+++ b/docs/dyn/genomics_v1.reads.html
@@ -243,17 +243,17 @@
],
},
"duplicateFragment": True or False, # The fragment is a PCR or optical duplicate (SAM flag 0x400).
- "supplementaryAlignment": True or False, # Whether this alignment is supplementary. Equivalent to SAM flag 0x800.
- # Supplementary alignments are used in the representation of a chimeric
- # alignment. In a chimeric alignment, a read is split into multiple
- # linear alignments that map to different reference contigs. The first
- # linear alignment in the read will be designated as the representative
- # alignment; the remaining linear alignments will be designated as
- # supplementary alignments. These alignments may have different mapping
- # quality scores. In each linear alignment in a chimeric alignment, the read
- # will be hard clipped. The `alignedSequence` and
- # `alignedQuality` fields in the alignment record will only
- # represent the bases for its respective linear alignment.
+ "nextMatePosition": { # An abstraction for referring to a genomic position, in relation to some # The mapping of the primary alignment of the
+ # `(readNumber+1)%numberReads` read in the fragment. It replaces
+ # mate position and mate strand in SAM.
+ # already known reference. For now, represents a genomic position as a
+ # reference name, a base number on that reference (0-based), and a
+ # determination of forward or reverse strand.
+ "position": "A String", # The 0-based offset from the start of the forward strand for that reference.
+ "reverseStrand": True or False, # Whether this position is on the reverse strand, as opposed to the forward
+ # strand.
+ "referenceName": "A String", # The name of the reference in whatever reference set is being used.
+ },
"readGroupSetId": "A String", # The ID of the read group set this read belongs to. A read belongs to
# exactly one read group set.
"alignedQuality": [ # The quality of the read sequence contained in this alignment record
@@ -276,17 +276,17 @@
# one read group. This is a server-generated ID which is distinct from SAM's
# RG tag (for that value, see
# ReadGroup.name).
- "nextMatePosition": { # An abstraction for referring to a genomic position, in relation to some # The mapping of the primary alignment of the
- # `(readNumber+1)%numberReads` read in the fragment. It replaces
- # mate position and mate strand in SAM.
- # already known reference. For now, represents a genomic position as a
- # reference name, a base number on that reference (0-based), and a
- # determination of forward or reverse strand.
- "position": "A String", # The 0-based offset from the start of the forward strand for that reference.
- "reverseStrand": True or False, # Whether this position is on the reverse strand, as opposed to the forward
- # strand.
- "referenceName": "A String", # The name of the reference in whatever reference set is being used.
- },
+ "supplementaryAlignment": True or False, # Whether this alignment is supplementary. Equivalent to SAM flag 0x800.
+ # Supplementary alignments are used in the representation of a chimeric
+ # alignment. In a chimeric alignment, a read is split into multiple
+ # linear alignments that map to different reference contigs. The first
+ # linear alignment in the read will be designated as the representative
+ # alignment; the remaining linear alignments will be designated as
+ # supplementary alignments. These alignments may have different mapping
+ # quality scores. In each linear alignment in a chimeric alignment, the read
+ # will be hard clipped. The `alignedSequence` and
+ # `alignedQuality` fields in the alignment record will only
+ # represent the bases for its respective linear alignment.
"numberReads": 42, # The number of reads in the fragment (extension to SAM flag 0x1).
"fragmentLength": 42, # The observed length of the fragment, equivalent to TLEN in SAM.
"alignedSequence": "A String", # The bases of the read sequence contained in this alignment record,