| Craig Citro | 065b530 | 2014-08-14 00:47:23 -0700 | [diff] [blame] | 1 | <html><body> |
| 2 | <style> |
| 3 | |
| 4 | body, h1, h2, h3, div, span, p, pre, a { |
| 5 | margin: 0; |
| 6 | padding: 0; |
| 7 | border: 0; |
| 8 | font-weight: inherit; |
| 9 | font-style: inherit; |
| 10 | font-size: 100%; |
| 11 | font-family: inherit; |
| 12 | vertical-align: baseline; |
| 13 | } |
| 14 | |
| 15 | body { |
| 16 | font-size: 13px; |
| 17 | padding: 1em; |
| 18 | } |
| 19 | |
| 20 | h1 { |
| 21 | font-size: 26px; |
| 22 | margin-bottom: 1em; |
| 23 | } |
| 24 | |
| 25 | h2 { |
| 26 | font-size: 24px; |
| 27 | margin-bottom: 1em; |
| 28 | } |
| 29 | |
| 30 | h3 { |
| 31 | font-size: 20px; |
| 32 | margin-bottom: 1em; |
| 33 | margin-top: 1em; |
| 34 | } |
| 35 | |
| 36 | pre, code { |
| 37 | line-height: 1.5; |
| 38 | font-family: Monaco, 'DejaVu Sans Mono', 'Bitstream Vera Sans Mono', 'Lucida Console', monospace; |
| 39 | } |
| 40 | |
| 41 | pre { |
| 42 | margin-top: 0.5em; |
| 43 | } |
| 44 | |
| 45 | h1, h2, h3, p { |
| 46 | font-family: Arial, sans serif; |
| 47 | } |
| 48 | |
| 49 | h1, h2, h3 { |
| 50 | border-bottom: solid #CCC 1px; |
| 51 | } |
| 52 | |
| 53 | .toc_element { |
| 54 | margin-top: 0.5em; |
| 55 | } |
| 56 | |
| 57 | .firstline { |
| 58 | margin-left: 2 em; |
| 59 | } |
| 60 | |
| 61 | .method { |
| 62 | margin-top: 1em; |
| 63 | border: solid 1px #CCC; |
| 64 | padding: 1em; |
| 65 | background: #EEE; |
| 66 | } |
| 67 | |
| 68 | .details { |
| 69 | font-weight: bold; |
| 70 | font-size: 14px; |
| 71 | } |
| 72 | |
| 73 | </style> |
| 74 | |
| 75 | <h1><a href="genomics_v1beta.html">Genomics API</a> . <a href="genomics_v1beta.experimental.html">experimental</a> . <a href="genomics_v1beta.experimental.jobs.html">jobs</a></h1> |
| 76 | <h2>Instance Methods</h2> |
| 77 | <p class="toc_element"> |
| 78 | <code><a href="#create">create(body)</a></code></p> |
| 79 | <p class="firstline">Creates and asynchronously runs an ad-hoc job. This is an experimental call and may be removed or changed at any time.</p> |
| 80 | <h3>Method Details</h3> |
| 81 | <div class="method"> |
| 82 | <code class="details" id="create">create(body)</code> |
| 83 | <pre>Creates and asynchronously runs an ad-hoc job. This is an experimental call and may be removed or changed at any time. |
| 84 | |
| 85 | Args: |
| 86 | body: object, The request body. (required) |
| 87 | The object takes the form of: |
| 88 | |
| Craig Citro | bdd05a8 | 2014-10-17 20:32:03 -0700 | [diff] [blame] | 89 | { # The job creation request. |
| Craig Citro | 0e5b9bf | 2014-10-15 10:26:14 -0700 | [diff] [blame] | 90 | "pairedSourceUris": [ # A list of Google Cloud Storage URIs of paired end .fastq files to operate upon. If specified, this represents the second file of each paired .fastq file. The first file of each pair should be specified in sourceUris. |
| Craig Citro | 065b530 | 2014-08-14 00:47:23 -0700 | [diff] [blame] | 91 | "A String", |
| 92 | ], |
| 93 | "projectId": "A String", # Required. The Google Cloud Project ID with which to associate the request. |
| Craig Citro | 0e5b9bf | 2014-10-15 10:26:14 -0700 | [diff] [blame] | 94 | "align": True or False, # Specifies whether or not to run the alignment pipeline. At least one of align or callVariants must be provided. |
| 95 | "callVariants": True or False, # Specifies whether or not to run the variant calling pipeline. If specified, alignment will be performed first and the aligned BAMs will passed as input to the variant caller. At least one of align or callVariants must be provided. |
| 96 | "sourceUris": [ # A list of Google Cloud Storage URIs of data files to operate upon. These can be .bam, interleaved .fastq, or paired .fastq. If specifying paired .fastq files, the first of each pair of files should be listed here, and the second of each pair should be listed in pairedSourceUris. |
| Craig Citro | 065b530 | 2014-08-14 00:47:23 -0700 | [diff] [blame] | 97 | "A String", |
| 98 | ], |
| Craig Citro | 0e5b9bf | 2014-10-15 10:26:14 -0700 | [diff] [blame] | 99 | "gcsOutputPath": "A String", # Specifies where to copy the results of certain pipelines. This should be in the form of gs://bucket/path. |
| Craig Citro | 065b530 | 2014-08-14 00:47:23 -0700 | [diff] [blame] | 100 | } |
| 101 | |
| 102 | |
| 103 | Returns: |
| 104 | An object of the form: |
| 105 | |
| 106 | { # The job creation response. |
| 107 | "jobId": "A String", # A job ID that can be used to get status information. |
| 108 | }</pre> |
| 109 | </div> |
| 110 | |
| 111 | </body></html> |